STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE40840.1Glycerol-3-phosphate cytidylyltransferase. (387 aa)    
Predicted Functional Partners:
SFE40800.1
Phosphorylcholine metabolism protein LicD.
 
     0.691
hldE
D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 
0.643
SFE53710.1
Acetolactate synthase, large subunit.
  
 
 0.630
SFE73183.1
Acetolactate synthase, large subunit.
  
 
 0.630
SFE06342.1
methylmalonyl-CoA decarboxylase alpha subunit.
   
  0.621
gpsA
Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.599
SFE06296.1
glutaconyl-CoA decarboxylase.
   
 
 0.585
SFE26530.1
Putative hydrolase of the HAD superfamily.
  
 
  0.581
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
  0.572
SFE55755.1
2,3-dimethylmalate lyase.
    
  0.567
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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