STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE51467.1Nitroreductase. (170 aa)    
Predicted Functional Partners:
SFE51498.1
Hypothetical protein.
       0.671
SFE82294.1
Nitroreductase.
  
     0.547
SFE73993.1
ABC-type multidrug transport system, permease component.
 
    0.514
SFE51435.1
Magnesium chelatase family protein.
       0.473
SFE51541.1
Hypothetical protein.
       0.459
SFE38969.1
Long-chain acyl-CoA synthetase.
    
   0.452
SFE70222.1
Long-chain acyl-CoA synthetase.
    
   0.452
SFE86548.1
Long-chain acyl-CoA synthetase.
    
   0.452
SFE42916.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
 
 0.450
SFE51394.1
Uncharacterised protein family UPF0102; Belongs to the UPF0102 family.
       0.444
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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