STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE68249.1Hypothetical protein. (42 aa)    
Predicted Functional Partners:
SFE68275.1
YvrJ protein family protein.
       0.634
SFE68305.1
Protein of unknown function.
       0.551
SFE68342.1
Protein of unknown function.
       0.484
SFE68221.1
Addiction module antidote protein, HigA family.
       0.473
SFE68135.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.410
SFE68185.1
heptose-I-phosphate ethanolaminephosphotransferase.
       0.410
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.