STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE67690.1Dipeptidase. Metallo peptidase. MEROPS family M19. (315 aa)    
Predicted Functional Partners:
SFE67751.1
Tripeptide aminopeptidase.
 
     0.571
SFE67724.1
C4-dicarboxylate transporter, DcuC family.
       0.533
SFE67657.1
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain.
       0.532
SFE08489.1
MFS transporter, FSR family, fosmidomycin resistance protein.
  
  
  0.431
SFE65884.1
L-threonine O-3-phosphate decarboxylase.
   
 
  0.423
SFE76149.1
Histidinol-phosphate aminotransferase.
   
 
  0.423
SFE46828.1
IMP dehydrogenase.
  
 
  0.419
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.