STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE70312.1Stage V sporulation protein B. (532 aa)    
Predicted Functional Partners:
SFE56820.1
Uncharacterized protein, UPF0297 family.
  
     0.702
SFE03255.1
RNA polymerase, sigma 30 subunit, SigH; Belongs to the sigma-70 factor family.
  
    0.695
SFE03923.1
Glutamine synthetase.
 
     0.647
SFE34343.1
Cell division septal protein FtsQ; Essential cell division protein.
  
     0.645
SFE66542.1
tRNA (adenine22-N1)-methyltransferase.
  
     0.635
SFE70279.1
Peptidase family M23.
       0.625
SFE00878.1
Hypothetical protein.
 
     0.604
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.550
polC
DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.528
SFE02837.1
Large subunit ribosomal protein L7A.
  
    0.524
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.