STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE72888.1Branched-chain amino acid transport system ATP-binding protein. (258 aa)    
Predicted Functional Partners:
SFE72858.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.998
SFE48410.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
  0.989
SFE72830.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.985
SFE72805.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
  
  0.959
SFE72926.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
  
 
0.934
SFE48435.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
  0.911
SFE82200.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
  
  0.877
SFE48460.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
  
  0.851
SFE48345.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
  
 
0.644
SFE04205.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
0.640
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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