STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ77987.1Protein of unknown function. (200 aa)    
Predicted Functional Partners:
SHK58382.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.814
SHJ94073.1
Molecular chaperone DnaJ.
 
 
 0.742
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
  
 
 0.706
SHK16414.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.705
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.656
SHJ67956.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.646
SHJ78544.1
L-glutamine synthetase.
  
 
 0.621
SHJ84215.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.601
SHJ90927.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.601
SHK41183.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.598
Your Current Organism:
Tepidibacter formicigenes
NCBI taxonomy Id: 1123349
Other names: T. formicigenes DSM 15518, Tepidibacter formicigenes DSM 15518
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