STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ79860.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
SHJ44779.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.770
SHJ89701.1
Hypothetical protein.
  
 0.674
SHK56248.1
Subtilase family protein.
 
 0.661
SHJ91068.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 0.608
SHK11091.1
Intein C-terminal splicing region/intein N-terminal splicing region.
  
 0.608
SHK39127.1
Hypothetical protein.
 
    0.589
SHK15819.1
Hypothetical protein.
 
    0.585
SHK64537.1
S-layer homology domain-containing protein.
    
 
 0.575
SHJ90871.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 0.573
SHJ68079.1
Hypothetical protein.
  
 0.567
Your Current Organism:
Tepidibacter formicigenes
NCBI taxonomy Id: 1123349
Other names: T. formicigenes DSM 15518, Tepidibacter formicigenes DSM 15518
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.