STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ98924.1Spore cortex biosynthesis protein YabQ. (116 aa)    
Predicted Functional Partners:
SHJ98897.1
Sporulation protein YabP.
 
  
 0.953
SHJ98951.1
Cell division protein FtsL.
 
    0.867
SHJ98978.1
Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.
       0.811
SHK14788.1
Sporulation protein YqfC.
 
  
 0.789
SHJ98834.1
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
    0.786
SHJ98866.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
  
    0.785
SHJ99007.1
Stage II sporulation protein E.
 
     0.768
SHJ98261.1
Hypothetical protein.
  
     0.767
SHK48915.1
Protein of unknown function.
  
     0.758
SHJ87920.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Tepidibacter formicigenes
NCBI taxonomy Id: 1123349
Other names: T. formicigenes DSM 15518, Tepidibacter formicigenes DSM 15518
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