STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK48066.1S-layer homology domain-containing protein. (865 aa)    
Predicted Functional Partners:
SHK58382.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.853
SHK41183.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.851
SHJ70758.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.816
SHK48167.1
Copper amine oxidase N-terminal domain-containing protein.
 
     0.781
SHK20203.1
S-layer homology domain-containing protein.
  
     0.761
SHJ85238.1
Outer membrane efflux protein.
 
     0.749
SHJ92972.1
Predicted secreted protein.
  
  
 0.724
SHJ86266.1
Polysaccharide pyruvyl transferase CsaB.
  
     0.713
SHK38323.1
Outer membrane protein TolC.
 
     0.713
SHK39089.1
Copper amine oxidase N-terminal domain-containing protein.
 
     0.710
Your Current Organism:
Tepidibacter formicigenes
NCBI taxonomy Id: 1123349
Other names: T. formicigenes DSM 15518, Tepidibacter formicigenes DSM 15518
Server load: low (24%) [HD]