STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH01490.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
SHH01510.1
N-acetyldiaminopimelate deacetylase.
 
     0.815
SHH01180.1
Hypothetical protein.
    
   0.703
SHH48340.1
Hypothetical protein.
  
     0.543
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.521
SHH52327.1
DnaD and phage-associated domain-containing protein.
  
     0.516
SHG92789.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.510
SHH08014.1
Nitroreductase.
  
  
 0.499
SHH01473.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.490
SHH28228.1
YceG-like family protein.
  
     0.490
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.489
Your Current Organism:
Tepidibacter thalassicus
NCBI taxonomy Id: 1123350
Other names: T. thalassicus DSM 15285, Tepidibacter thalassicus DSM 15285
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