STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH17220.1Indolepyruvate ferredoxin oxidoreductase beta subunit. (195 aa)    
Predicted Functional Partners:
SHH12610.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SHH17194.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 0.996
SHH19255.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.872
SHH50079.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.872
SHH50103.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.804
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.780
SHH19239.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.779
SHH18122.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.753
SHH35509.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.725
SHH46917.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.719
Your Current Organism:
Tepidibacter thalassicus
NCBI taxonomy Id: 1123350
Other names: T. thalassicus DSM 15285, Tepidibacter thalassicus DSM 15285
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