STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH42062.1Protein of unknown function. (73 aa)    
Predicted Functional Partners:
SHH42048.1
Protein of unknown function.
 
     0.937
SHH42079.1
YvrJ protein family protein.
 
     0.865
SHH56045.1
YvrJ protein family protein.
 
     0.653
SHH42028.1
Hypothetical protein.
       0.488
SHG93865.1
Sporulation protein, YlmC/YmxH family.
  
     0.485
SHH32564.1
Spore coat assemly protein.
  
     0.437
SHH47241.1
Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily.
  
     0.422
Your Current Organism:
Tepidibacter thalassicus
NCBI taxonomy Id: 1123350
Other names: T. thalassicus DSM 15285, Tepidibacter thalassicus DSM 15285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.