STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH48520.1Glycosyltransferase involved in cell wall bisynthesis. (367 aa)    
Predicted Functional Partners:
SHH48496.1
O-antigen ligase.
 
 
 0.915
SHH48631.1
Polysaccharide pyruvyl transferase CsaB.
 
 
 0.915
SHH48555.1
Protein of unknown function.
 
     0.814
murJ-2
Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
 
     0.809
SHH48533.1
Protein of unknown function.
       0.760
SHG92190.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
 0.731
SHH34084.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.715
SHH33832.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.615
SHH48458.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
     
 0.615
SHH20521.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.612
Your Current Organism:
Tepidibacter thalassicus
NCBI taxonomy Id: 1123350
Other names: T. thalassicus DSM 15285, Tepidibacter thalassicus DSM 15285
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