STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425565_00438Unannotated protein. (420 aa)    
Predicted Functional Partners:
GCA_000425565_00437
Unannotated protein.
     0.929
GCA_000425565_00436
Unannotated protein.
 
    0.889
GCA_000425565_00432
Unannotated protein.
 
    0.855
GCA_000425565_00435
Unannotated protein.
 
    0.850
GCA_000425565_00433
Unannotated protein.
    0.841
GCA_000425565_00434
Unannotated protein.
 
    0.807
GCA_000425565_00356
Unannotated protein.
  
    0.775
GCA_000425565_00439
Unannotated protein.
       0.773
GCA_000425565_00353
Unannotated protein.
 
    0.771
GCA_000425565_01712
Unannotated protein.
  
 
 0.759
Your Current Organism:
Tepidiphilus margaritifer
NCBI taxonomy Id: 1123354
Other names: T. margaritifer DSM 15129, Tepidiphilus margaritifer DSM 15129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.