STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425565_00635Unannotated protein. (1225 aa)    
Predicted Functional Partners:
GCA_000425565_00479
Unannotated protein.
 
 
 0.998
GCA_000425565_01674
Unannotated protein.
  
 
 0.946
GCA_000425565_01531
Unannotated protein.
  
 
 0.921
GCA_000425565_00480
Unannotated protein.
  
 
 0.920
GCA_000425565_00481
Unannotated protein.
  
 
 0.918
GCA_000425565_00301
Unannotated protein.
  
 
 0.906
GCA_000425565_01233
Unannotated protein.
  
 
 0.898
GCA_000425565_01176
Unannotated protein.
  
 
 0.858
GCA_000425565_00572
Unannotated protein.
  
 0.856
GCA_000425565_01738
Unannotated protein.
  
 
 0.841
Your Current Organism:
Tepidiphilus margaritifer
NCBI taxonomy Id: 1123354
Other names: T. margaritifer DSM 15129, Tepidiphilus margaritifer DSM 15129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.