STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425585_00313Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_000425585_02455
Unannotated protein.
  
 
  0.602
GCA_000425585_00653
Unannotated protein.
     
 0.587
GCA_000425585_01772
Unannotated protein.
   
 0.565
GCA_000425585_03941
Unannotated protein.
    
 0.539
GCA_000425585_02233
Unannotated protein.
    
 0.532
GCA_000425585_00339
Unannotated protein.
    
  0.526
GCA_000425585_00343
Unannotated protein.
    
  0.526
GCA_000425585_00487
Unannotated protein.
 
 
  0.526
GCA_000425585_01300
Unannotated protein.
    
  0.526
GCA_000425585_01455
Unannotated protein.
    
  0.526
Your Current Organism:
Terrimonas ferruginea
NCBI taxonomy Id: 1123356
Other names: T. ferruginea DSM 30193, Terrimonas ferruginea ATCC 13524, Terrimonas ferruginea DSM 30193, Terrimonas ferruginea IFO 14992, Terrimonas ferruginea NBRC 14992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.