STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425585_01031Unannotated protein. (355 aa)    
Predicted Functional Partners:
GCA_000425585_01030
Unannotated protein.
       0.773
GCA_000425585_02023
Unannotated protein.
  
     0.771
GCA_000425585_01622
Unannotated protein.
 
 0.624
GCA_000425585_01386
Unannotated protein.
  
 
  0.536
GCA_000425585_04001
Unannotated protein.
    
 0.532
GCA_000425585_00346
Unannotated protein.
  
 
  0.516
GCA_000425585_02154
Unannotated protein.
  
 
   0.513
GCA_000425585_01650
Unannotated protein.
   
  0.512
GCA_000425585_01807
Unannotated protein.
   
  0.508
GCA_000425585_01033
Unannotated protein.
 
  0.495
Your Current Organism:
Terrimonas ferruginea
NCBI taxonomy Id: 1123356
Other names: T. ferruginea DSM 30193, Terrimonas ferruginea ATCC 13524, Terrimonas ferruginea DSM 30193, Terrimonas ferruginea IFO 14992, Terrimonas ferruginea NBRC 14992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.