STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425585_03610Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_000425585_01852
Unannotated protein.
 
 
 0.943
GCA_000425585_03533
Unannotated protein.
    
 
 0.920
GCA_000425585_00102
Unannotated protein.
 
 
 0.840
GCA_000425585_00771
Unannotated protein.
 
 
0.757
GCA_000425585_03611
Unannotated protein.
       0.697
GCA_000425585_02875
Unannotated protein.
  
 
 0.620
GCA_000425585_03786
Unannotated protein.
  
   
 0.580
GCA_000425585_01479
Unannotated protein.
     
 0.568
GCA_000425585_00096
Unannotated protein.
 
   
 0.549
GCA_000425585_01971
Unannotated protein.
   
 
 0.548
Your Current Organism:
Terrimonas ferruginea
NCBI taxonomy Id: 1123356
Other names: T. ferruginea DSM 30193, Terrimonas ferruginea ATCC 13524, Terrimonas ferruginea DSM 30193, Terrimonas ferruginea IFO 14992, Terrimonas ferruginea NBRC 14992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.