STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ29600.1Putative ABC transport system ATP-binding protein. (244 aa)    
Predicted Functional Partners:
SHI57244.1
Putative ABC transport system permease protein.
 0.969
SHJ29572.1
Putative ABC transport system permease protein.
 
 
 0.952
SHJ19140.1
ABC-type antimicrobial peptide transport system, permease component.
 0.943
SHJ50036.1
Putative ABC transport system permease protein.
 0.940
SHI48825.1
ABC-2 type transport system ATP-binding protein.
 
    
0.915
SHI95731.1
ABC-2 type transport system ATP-binding protein.
 
    
0.914
SHJ94104.1
Putative ABC transport system permease protein.
 0.861
SHJ24837.1
ABC-type lipoprotein export system, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
0.773
SHJ63522.1
Putative ABC transport system permease protein.
  
 0.769
SHJ42130.1
Putative ABC transport system permease protein.
 
 
 0.746
Your Current Organism:
Tessaracoccus bendigoensis
NCBI taxonomy Id: 1123357
Other names: T. bendigoensis DSM 12906, Tessaracoccus bendigoensis DSM 12906
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.