STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX80808.1Branched-chain amino acid transport system permease protein LivM; TC 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family. (326 aa)    
Predicted Functional Partners:
EPX80809.1
High-affinity branched-chain amino acid transport system permease protein LivH; TC 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EPX80807.1
Branched-chain amino acid transport ATP-binding protein LivG; TC 3.A.1.4.1.
 
 0.993
EPX80806.1
Branched-chain amino acid transport ATP-binding protein LivF; TC 3.A.1.4.1.
 
 0.991
EPX80810.1
High-affinity leucine-specific transport system, periplasmic binding protein LivK; TC 3.A.1.4.1.
 
 
 0.982
EPX80149.1
Hypothetical protein; IPR001687; IPR003439; IPR003593; COG0411.
 
 0.954
EPX77874.1
Branched-chain amino acid transport ATP-binding protein LivG; TC 3.A.1.4.1.
 
 0.950
EPX78902.1
Branched-chain amino acid transport ATP-binding protein LivG; TC 3.A.1.4.1.
 
 0.933
EPX78903.1
Branched-chain amino acid transport ATP-binding protein LivF; TC 3.A.1.4.1.
 
 0.930
EPX78901.1
Branched-chain amino acid ABC transporter, amino acid-binding protein; TC 3.A.1.4.1.
 
 
 0.928
EPX80148.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.927
Your Current Organism:
Litoreibacter arenae
NCBI taxonomy Id: 1123360
Other names: L. arenae DSM 19593, Litoreibacter arenae DSM 19593, Litoreibacter arenae GA2-M15, Litoreibacter arenae NBRC 106423, Thalassobacter arenae DSM 19593, Thalassobacter sp. GA2-M15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.