STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF27680.14a-hydroxytetrahydrobiopterin dehydratase. (101 aa)    
Predicted Functional Partners:
SDG04695.1
Phenylalanine 4-hydroxylase.
 
 0.991
SDF42689.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.790
SDF67364.1
Homogentisate 1,2-dioxygenase.
  
  
 0.723
SDG02136.1
Fumarylacetoacetate hydrolase.
 
  
 0.683
SDF27726.1
3-hydroxybutyrate dehydrogenase.
  
 
 0.622
SDF04302.1
Hypothetical protein.
    
 0.603
SDF93694.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.592
SDG36727.1
Hypothetical protein.
    
 0.585
SDF27749.1
Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain.
       0.549
SDF41952.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.548
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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