STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF57576.1Glycosyltransferase involved in cell wall bisynthesis. (409 aa)    
Predicted Functional Partners:
SDF23940.1
Glycosidase.
 
 0.882
SDF57668.1
Tetratricopeptide (TPR) repeat.
   
 0.861
SDF45099.1
Hypothetical protein.
 
      0.787
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.780
SDF41430.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.750
SDF04077.1
Hemolysin-type calcium-binding repeat-containing protein.
  
   
 0.698
SDF89488.1
Hemolysin-type calcium-binding repeat-containing protein.
  
   
 0.692
SDG60344.1
Hemolysin-type calcium-binding repeat-containing protein.
  
   
 0.688
SDG52783.1
Hemolysin-type calcium-binding repeat-containing protein.
  
   
 0.687
SDG60459.1
Hemolysin-type calcium-binding repeat-containing protein.
  
     0.680
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.