STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF64431.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
SDF64408.1
L-gulonolactone oxidase.
  
 0.984
SDF64316.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.953
SDF64478.1
UDP-galactopyranose mutase.
 
     0.915
SDF64449.1
Nucleoside-diphosphate-sugar epimerase.
 
 
 0.897
SDG31429.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.853
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.808
SDF64497.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.755
SDG23233.1
MaoC like domain-containing protein.
 
  
 0.755
SDF64522.1
Hypothetical protein.
       0.746
SDF64545.1
Protein of unknown function.
       0.741
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.