STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF83590.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
SDF83578.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase.
       0.773
SDF83619.1
Hypothetical protein.
       0.773
SDF83642.1
Hypothetical protein.
       0.773
SDF83657.1
Hypothetical protein.
       0.773
SDF83529.1
Hypothetical protein.
       0.742
SDF83487.1
Hypothetical protein.
       0.737
SDF83510.1
Hypothetical protein.
       0.737
SDF83552.1
Hypothetical protein.
       0.737
SDF83681.1
Hypothetical protein.
       0.538
SDF83453.1
Encapsulating protein for peroxidase.
       0.469
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.