STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF97311.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
glk
Glucokinase; Belongs to the bacterial glucokinase family.
       0.773
SDF27701.1
NTE family protein.
    
 0.640
SDF97264.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
       0.590
SDF31122.1
Hypothetical chaperone protein.
  
  
  0.574
SDF74670.1
Glycine/D-amino acid oxidase.
  
     0.498
SDF74969.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.425
SDF85528.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.425
SDG14565.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.425
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.