STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG05029.14-carboxymuconolactone decarboxylase. (188 aa)    
Predicted Functional Partners:
SDF97449.1
3-oxoadipate enol-lactonase.
    
 0.789
SDG05056.1
Glutathione S-transferase.
       0.686
SDG05021.1
NADPH:quinone reductase.
       0.682
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
   
    0.562
SDG05000.1
Helix-turn-helix domain-containing protein.
       0.454
SDG10660.1
Polar amino acid transport system substrate-binding protein.
  
    0.444
SDG05068.1
Phosphonoacetate hydrolase.
       0.438
SDF23083.1
Alpha/beta hydrolase family protein.
  
  
  0.436
SDF08978.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
  0.429
SDF41598.1
4-carboxymuconolactone decarboxylase.
    
 0.420
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.