STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG15895.1Autotransporter-associated beta strand repeat-containing protein. (1002 aa)    
Predicted Functional Partners:
SDG22826.1
acyl-CoA thioesterase-1.
  
 0.977
SDG10717.1
Regulatory P domain of the subtilisin-like proprotein convertase; Belongs to the peptidase S8 family.
  
 
 0.913
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.828
SDG04890.1
Protein of unknown function.
  
 
   0.825
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.823
SDF57240.1
Glycosyltransferase, GT2 family.
  
  
 0.798
SDG27158.1
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
    
   0.775
SDF75852.1
UDP:flavonoid glycosyltransferase YjiC, YdhE family.
  
     0.758
SDF23853.1
Membrane fusion protein, epimerase transport system.
 
   
 0.719
SDG50153.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
  
     0.717
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.