STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG16670.1Putative tricarboxylic transport membrane protein. (519 aa)    
Predicted Functional Partners:
SDG16658.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 
 0.954
SDF55078.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 0.909
SDG17176.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 0.909
SDG32831.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 
 0.909
SDG46231.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 0.909
SDG22476.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 
 0.908
SDG46200.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
 
 0.908
SDG16698.1
Tripartite tricarboxylate transporter TctB family protein.
       0.701
SDF55093.1
Putative tricarboxylic transport membrane protein.
  
 
 0.663
SDG46260.1
Tripartite tricarboxylate transporter TctB family protein.
  
 
 0.657
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.