STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG21091.1Microcin C transport system substrate-binding protein. (618 aa)    
Predicted Functional Partners:
SDG21047.1
Microcin C transport system permease protein.
 
 0.994
SDG21024.1
Microcin C transport system permease protein.
 
 
 0.991
SDG21004.1
Microcin C transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.990
SDG16330.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.965
SDF87392.1
Ribosome-dependent ATPase.
  
 
 0.941
SDF50375.1
Peptide/nickel transport system substrate-binding protein.
  
 
0.914
SDG02398.1
Peptide/nickel transport system substrate-binding protein.
  
 
 0.914
SDG52627.1
Peptide/nickel transport system substrate-binding protein.
  
 
 0.914
SDF13528.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
  
 
 0.913
SDF13953.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
  
 
 0.913
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.