STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG22175.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-). (428 aa)    
Predicted Functional Partners:
SDG22195.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 0.990
SDG22220.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 0.988
SDG22153.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 0.964
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.962
ugpE-2
Sn-glycerol 3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.956
SDG02059.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.955
SDG55801.1
Sn-glycerol 3-phosphate transport system permease protein.
 
 0.953
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 0.882
SDG41141.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.873
ugpC-2
Sn-glycerol 3-phosphate transport system ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 0.873
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.