STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG44492.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
SDG10717.1
Regulatory P domain of the subtilisin-like proprotein convertase; Belongs to the peptidase S8 family.
  
 0.996
SDG10263.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.794
SDG44449.1
Hypothetical protein.
       0.773
SDG44467.1
Hypothetical protein.
       0.773
SDG44507.1
Hypothetical protein.
       0.773
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 0.727
SDF24619.1
Outer membrane protein OmpA.
    
 0.727
SDF30552.1
OmpA family protein.
    
 0.727
SDF58167.1
Outer membrane protein OmpA.
    
 0.727
SDF62784.1
OmpA-OmpF porin, OOP family.
    
 0.727
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.