STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG52469.1Hypothetical protein. (666 aa)    
Predicted Functional Partners:
SDG52485.1
Hypothetical protein.
 
     0.943
SDG26991.1
Hypothetical protein.
  
 
 0.928
SDF37557.1
Methylase of chemotaxis methyl-accepting proteins.
   
 0.924
SDF74742.1
Hypothetical protein.
  
 0.922
SDF40246.1
Signal transduction histidine kinase.
   
 0.920
SDF57898.1
Signal transduction histidine kinase.
   
 0.920
SDG43077.1
Signal transduction histidine kinase.
   
 0.920
SDF52034.1
PAS domain S-box-containing protein.
   
 0.916
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.904
SDG17201.1
PAS domain S-box-containing protein.
   
 0.886
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.