STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG52752.1Ectoine hydroxylase. (266 aa)    
Predicted Functional Partners:
SDG52763.1
Predicted homoserine dehydrogenase, contains C-terminal SAF domain.
       0.783
SDF96098.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.737
SDG17766.1
Chlorinating enzyme.
 
     0.733
SDF16823.1
Phytanoyl-CoA dioxygenase (PhyH).
 
     0.732
SDF07147.1
Xaa-Pro dipeptidase.
     
 0.714
SDF65203.1
Chlorinating enzyme.
  
     0.703
SDF42890.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
  
 
0.645
SDG28327.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
  
 
0.643
SDG52729.1
DNA-binding transcriptional regulator, GntR family.
       0.626
SDF67017.1
Gamma-butyrobetaine dioxygenase.
  
 
  0.521
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.