STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C666_06390Unannotated protein; Belongs to the DNA photolyase family. (480 aa)    
Predicted Functional Partners:
ybeY
Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.768
C666_06375
Unannotated protein.
       0.588
C666_06380
Unannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.588
C666_06385
Unannotated protein; Belongs to the UPF0301 (AlgH) family.
       0.588
C666_06395
Unannotated protein.
       0.576
C666_10885
Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.543
C666_01860
Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.543
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.516
C666_00150
Unannotated protein.
   
   0.516
C666_08240
Unannotated protein.
    
   0.506
Your Current Organism:
Thauera linaloolentis
NCBI taxonomy Id: 1123367
Other names: T. linaloolentis 47Lol = DSM 12138, Thauera linaloolentis 47Lol, Thauera linaloolentis 47Lol = DSM 12138, Thauera linaloolentis DSM 12138, Thauera linaloolentis DSM 12138 = 47Lol, Thauera linaloolentis NBRC 102519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.