STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysSUnannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (461 aa)    
Predicted Functional Partners:
C666_02330
Unannotated protein.
 
 
 0.830
C666_10260
Unannotated protein.
 
 
 0.773
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.729
metG
Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
  
 0.693
cysM
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.690
pheT
Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
  
 0.671
leuS
Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.665
C666_10255
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.657
thrS
Unannotated protein; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
 
  
 0.619
serS
Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
 
 0.612
Your Current Organism:
Thauera linaloolentis
NCBI taxonomy Id: 1123367
Other names: T. linaloolentis 47Lol = DSM 12138, Thauera linaloolentis 47Lol, Thauera linaloolentis 47Lol = DSM 12138, Thauera linaloolentis DSM 12138, Thauera linaloolentis DSM 12138 = 47Lol, Thauera linaloolentis NBRC 102519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.