STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423825_01114Unannotated protein. (104 aa)    
Predicted Functional Partners:
GCA_000423825_01113
Unannotated protein.
       0.800
GCA_000423825_01115
Unannotated protein.
       0.800
GCA_000423825_01116
Unannotated protein.
       0.800
GCA_000423825_01117
Unannotated protein.
       0.628
GCA_000423825_01118
Unannotated protein.
       0.628
GCA_000423825_01119
Unannotated protein.
       0.626
GCA_000423825_01112
Unannotated protein.
       0.563
GCA_000423825_01107
Unannotated protein.
       0.557
GCA_000423825_01108
Unannotated protein.
       0.557
GCA_000423825_01111
Unannotated protein.
       0.557
Your Current Organism:
Thermithiobacillus tepidarius
NCBI taxonomy Id: 1123368
Other names: T. tepidarius DSM 3134, Thermithiobacillus tepidarius DSM 3134
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.