STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG65334.1Stage III sporulation protein AB. (174 aa)    
Predicted Functional Partners:
SHG65362.1
Stage III sporulation protein AA.
 
  
 0.999
SHG65306.1
Stage III sporulation protein AC.
 
  
 0.981
SHG65278.1
Stage III sporulation protein AD.
 
  
 0.966
SHG65247.1
Stage III sporulation protein AE.
 
  
 0.964
SHG65189.1
Stage III sporulation protein AG.
 
  
 0.953
SHH30972.1
Stage II sporulation protein M.
  
  
 0.904
SHG65222.1
Stage III sporulation protein AF.
 
  
 0.872
SHG85888.1
Sporulation protein YqfC.
  
  
 0.844
SHG78082.1
Lon-like ATP-dependent protease.
  
    0.778
SHG65162.1
Stage III sporulation protein AH.
 
  
 0.757
Your Current Organism:
Thermosyntropha lipolytica
NCBI taxonomy Id: 1123382
Other names: T. lipolytica DSM 11003, Thermosyntropha lipolytica DSM 11003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.