STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG66247.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
SHG66178.1
Hypothetical protein.
       0.773
SHG66212.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.773
SHG66077.1
Tfp pilus assembly protein PilO.
       0.718
SHG66113.1
Tfp pilus assembly protein PilN.
       0.718
SHG66146.1
Type IV pilus assembly protein PilM.
       0.718
SHG66282.1
Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A.
       0.601
SHG66006.1
PmbA protein.
       0.484
SHG66043.1
Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62.
       0.484
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.456
Your Current Organism:
Thermosyntropha lipolytica
NCBI taxonomy Id: 1123382
Other names: T. lipolytica DSM 11003, Thermosyntropha lipolytica DSM 11003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.