STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG75882.1Putative spermidine/putrescine transport system permease protein. (299 aa)    
Predicted Functional Partners:
SHG75845.1
Putative spermidine/putrescine transport system permease protein.
 
 0.995
SHG75915.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
  
  0.973
SHG75810.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.964
SHG75773.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.927
SHG69541.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.890
SHG75986.1
Fe-S oxidoreductase.
 
     0.861
SHG69573.1
Putative spermidine/putrescine transport system ATP-binding protein.
 
 0.860
SHG47160.1
ABC transporter.
 
 0.852
SHG75954.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
 
     0.830
SHG76058.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
 
     0.696
Your Current Organism:
Thermosyntropha lipolytica
NCBI taxonomy Id: 1123382
Other names: T. lipolytica DSM 11003, Thermosyntropha lipolytica DSM 11003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.