STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG81050.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
SHG81028.1
Uncharacterized protein YrrD, contains PRC-barrel domain.
  
    0.806
SHG82737.1
Putative sporulation protein YtaF; Probably functions as a manganese efflux pump.
  
     0.733
SHG81079.1
Hypothetical protein.
       0.727
SHG81111.1
Predicted PurR-regulated permease PerM.
       0.701
SHH06157.1
Dipicolinate synthase subunit A.
  
     0.636
SHH16182.1
Protein of unknown function.
  
     0.614
SHG62429.1
YheC/D like ATP-grasp.
  
     0.592
SHG65247.1
Stage III sporulation protein AE.
  
     0.590
SHG62149.1
YheC/D like ATP-grasp.
  
     0.570
SHG78082.1
Lon-like ATP-dependent protease.
  
     0.567
Your Current Organism:
Thermosyntropha lipolytica
NCBI taxonomy Id: 1123382
Other names: T. lipolytica DSM 11003, Thermosyntropha lipolytica DSM 11003
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.