STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG90872.1Nucleotide-binding universal stress protein, UspA family. (139 aa)    
Predicted Functional Partners:
SHG90839.1
Transporter, CPA2 family.
 
   
 0.814
SHH06208.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.638
hpf
SSU ribosomal protein S30P /sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.467
SHG72650.1
Hpt domain-containing protein.
     
 0.457
SHG90913.1
Zinc-finger of transposase IS204/IS1001/IS1096/IS1165.
       0.457
SHH10695.1
Kef-type potassium/proton antiporter, CPA2 family (TC 2.A.37.1); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.455
SHG60459.1
Hypothetical protein.
     
 0.454
SHH15669.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.454
SHH36817.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.454
SHH30837.1
Pyrimidine-nucleoside phosphorylase.
   
    0.407
Your Current Organism:
Thermosyntropha lipolytica
NCBI taxonomy Id: 1123382
Other names: T. lipolytica DSM 11003, Thermosyntropha lipolytica DSM 11003
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