STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376265_00114Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000376265_00116
Unannotated protein.
 
     0.855
GCA_000376265_00115
Unannotated protein.
 
    0.843
GCA_000376265_00118
Unannotated protein.
 
     0.843
GCA_000376265_00113
Unannotated protein.
 
     0.842
GCA_000376265_00117
Unannotated protein.
 
     0.812
GCA_000376265_00112
Unannotated protein.
       0.805
GCA_000376265_00398
Unannotated protein.
  
     0.472
GCA_000376265_01362
Unannotated protein.
  
     0.449
GCA_000376265_00397
Unannotated protein.
  
     0.445
GCA_000376265_01160
Unannotated protein.
  
 
 
 0.445
Your Current Organism:
Thermus igniterrae
NCBI taxonomy Id: 1123388
Other names: T. igniterrae ATCC 700962, Thermus igniterrae ATCC 700962, Thermus igniterrae DSM 12459, Thermus igniterrae R-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.