STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376265_00925Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_000376265_00029
Unannotated protein.
 
 
 0.999
GCA_000376265_00924
Unannotated protein.
 0.999
GCA_000376265_02237
Unannotated protein.
 
 
 0.999
GCA_000376265_00167
Unannotated protein.
 
 
 0.990
GCA_000376265_00597
Unannotated protein.
 
  
 0.985
GCA_000376265_00598
Unannotated protein.
 
 
 0.946
GCA_000376265_00599
Unannotated protein.
 
  
 0.931
GCA_000376265_01110
Unannotated protein.
 
 
 
 0.887
GCA_000376265_01292
Unannotated protein.
  
    0.880
GCA_000376265_00131
Unannotated protein.
   
 
  0.850
Your Current Organism:
Thermus igniterrae
NCBI taxonomy Id: 1123388
Other names: T. igniterrae ATCC 700962, Thermus igniterrae ATCC 700962, Thermus igniterrae DSM 12459, Thermus igniterrae R-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.