STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC95174.1Two-component sensor kinase CbrA. (982 aa)    
Predicted Functional Partners:
SFD04167.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
 
 0.998
SFD33147.1
Hpt domain-containing protein.
  
 0.998
SFD56583.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.998
SFD18141.1
Dihydrolipoamide dehydrogenase.
   
 0.995
SFC99243.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.994
SFD06009.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.993
SFD80059.1
PAS domain S-box-containing protein.
 
0.993
SFD00101.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.989
SFD16805.1
GAF domain-containing protein.
  
 0.989
SFD92085.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.989
Your Current Organism:
Thiohalospira halophila
NCBI taxonomy Id: 1123397
Other names: T. halophila DSM 15071, Thiohalospira halophila DSM 15071, Thiohalospira halophila HL 3, halophilic bacterium HL 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.