STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD16388.1Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (390 aa)    
Predicted Functional Partners:
SFD16413.1
Multidrug efflux pump.
 0.988
SFD37894.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 0.978
SFD01444.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.965
SFD01419.1
Outer membrane protein.
 
 0.961
SFD05417.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.921
SFD01472.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.901
SFD34600.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.697
SFD05461.1
Outer membrane protein TolC.
 
 0.693
SFD02309.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
 
 0.645
SFD02344.1
Heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.635
Your Current Organism:
Thiohalospira halophila
NCBI taxonomy Id: 1123397
Other names: T. halophila DSM 15071, Thiohalospira halophila DSM 15071, Thiohalospira halophila HL 3, halophilic bacterium HL 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.