STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD58335.1Phosphonate transport system substrate-binding protein. (288 aa)    
Predicted Functional Partners:
SFD58289.1
His Kinase A (phospho-acceptor) domain-containing protein.
    
 0.826
SFD80059.1
PAS domain S-box-containing protein.
    
 0.810
SFD58367.1
Glyoxylase, beta-lactamase superfamily II.
 
    0.807
SFD58246.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
  
 0.777
SFD35521.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.755
SFD80148.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.755
SFD92116.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.755
SFD58412.1
Small redox-active disulfide protein 2.
       0.711
SFD18460.1
Hypothetical protein.
   
    0.646
SFD58447.1
Hypothetical protein.
       0.623
Your Current Organism:
Thiohalospira halophila
NCBI taxonomy Id: 1123397
Other names: T. halophila DSM 15071, Thiohalospira halophila DSM 15071, Thiohalospira halophila HL 3, halophilic bacterium HL 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.