STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD59009.1Glycosyltransferase involved in cell wall bisynthesis. (374 aa)    
Predicted Functional Partners:
SFD59039.1
Sulfotransferase family protein.
     0.988
SFC95498.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.824
SFD58968.1
Hypothetical protein.
  
    0.822
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.657
SFC97965.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.618
SFC98203.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.607
SFD01750.1
Starch phosphorylase.
  
 0.494
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.494
SFD08062.1
UDPglucose 6-dehydrogenase.
  
  
 0.470
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.457
Your Current Organism:
Thiohalospira halophila
NCBI taxonomy Id: 1123397
Other names: T. halophila DSM 15071, Thiohalospira halophila DSM 15071, Thiohalospira halophila HL 3, halophilic bacterium HL 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.