STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380185_00393Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_000380185_03344
Unannotated protein.
    
  0.734
GCA_000380185_03161
Unannotated protein.
    
  0.730
GCA_000380185_02068
Unannotated protein.
    
  0.715
GCA_000380185_03162
Unannotated protein.
    
  0.715
GCA_000380185_00392
Unannotated protein.
       0.693
GCA_000380185_00394
Unannotated protein.
       0.529
GCA_000380185_00048
Unannotated protein.
  
  
 0.516
GCA_000380185_01073
Unannotated protein.
  
  
 0.448
Your Current Organism:
Thiofilum flexile
NCBI taxonomy Id: 1123400
Other names: T. flexile DSM 14609, Thiofilum flexile DSM 14609, Thiothrix flexilis DSM 14609
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.