STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET27895.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
SET47189.1
Sel1 repeat-containing protein.
  
     0.770
SET12935.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.703
SET08575.1
ATPase family associated with various cellular activities (AAA).
   
 0.645
SET42047.1
Signal transduction histidine kinase.
   
 0.615
SET27916.1
Phage tail tape measure protein, lambda family.
       0.535
SES80365.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.416
SET27946.1
Uncharacterized protein, contains HEPN domain, UPF0332 family.
       0.416
SET27975.1
Hypothetical protein.
       0.416
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.402
Your Current Organism:
Thorsellia anophelis
NCBI taxonomy Id: 1123402
Other names: T. anophelis DSM 18579, Thorsellia anophelis DSM 18579
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